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Superfamilies

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Superfamily	Description	Architecture	Class	n° Families
5_ureB_sRNA	Superfamily of 5_ureB_sRNA	complex unclassified	structured_complex	1
Aar	Superfamily of Aar	complex unclassified	structured_complex	1
AbsR11	Superfamily of AbsR11	complex unclassified	structured_complex	1
AbsR28	Superfamily of AbsR28	complex unclassified	structured_complex	1
Afu_309	Superfamily of Afu_309	complex unclassified	structured_complex	1
Alfamo_CPB	Superfamily of Alfamo_CPB	complex unclassified	structured_complex	1
Alpha_RBS	Superfamily of Alpha_RBS	complex unclassified	structured_complex	1
ApoB_5_CRE	Superfamily of ApoB_5_CRE	complex unclassified	structured_complex	1
ar9	Superfamily of ar9	complex unclassified	structured_complex	1
asd	Superfamily of asd	complex unclassified	structured_complex	1
AsrC	Superfamily of AsrC	complex unclassified	structured_complex	1
Atu_At1	Superfamily of Atu_At1	complex unclassified	structured_complex	1
Atu_C3	Superfamily of Atu_C3	complex unclassified	structured_complex	1
Atu_L1	Superfamily of Atu_L1	complex unclassified	structured_complex	1
BASRCI153	Superfamily of BASRCI153	complex unclassified	structured_complex	1
BASRCI337	Superfamily of BASRCI337	complex unclassified	structured_complex	1
BASRCI408	Superfamily of BASRCI408	complex unclassified	structured_complex	1
BASRCI414	Superfamily of BASRCI414	complex unclassified	structured_complex	1
BASRCII26	Superfamily of BASRCII26	complex unclassified	structured_complex	1
bicoid_3	Superfamily of bicoid_3	complex unclassified	structured_complex	1
BjrC1505	Superfamily of BjrC1505	complex unclassified	structured_complex	1
Bp1_738	Superfamily of Bp1_738	complex unclassified	structured_complex	1
Bp1_781	Superfamily of Bp1_781	complex unclassified	structured_complex	1
Bp2_287	Superfamily of Bp2_287	complex unclassified	structured_complex	1
BSR0441	Superfamily of BSR0441	complex unclassified	structured_complex	1
BSR0602	Superfamily of BSR0602	complex unclassified	structured_complex	1
BSR0653	Superfamily of BSR0653	complex unclassified	structured_complex	1
BSR0709	Superfamily of BSR0709	complex unclassified	structured_complex	1
BSR0739	Superfamily of BSR0739	complex unclassified	structured_complex	1
BSR1073	Superfamily of BSR1073	complex unclassified	structured_complex	1
BsrG	Superfamily of BsrG	complex unclassified	structured_complex	1
BTH_s1	Superfamily of BTH_s1	complex unclassified	structured_complex	1
c-di-GMP-II	Superfamily of c-di-GMP-II	complex unclassified	structured_complex	1
C0719	Superfamily of C0719	complex unclassified	structured_complex	1
C1_109596F_thermometer	Superfamily of C1_109596F_thermometer	complex unclassified	structured_complex	1
CbSR1	Superfamily of CbSR1	complex unclassified	structured_complex	1
CbSR12	Superfamily of CbSR12	complex unclassified	structured_complex	1
CbSR2	Superfamily of CbSR2	complex unclassified	structured_complex	1
CbSR3	Superfamily of CbSR3	complex unclassified	structured_complex	1
CbSR4	Superfamily of CbSR4	complex unclassified	structured_complex	1
CbSR9	Superfamily of CbSR9	complex unclassified	structured_complex	1
CC2171	Superfamily of CC2171	complex unclassified	structured_complex	1
CDKN2B-AS	Superfamily of CDKN2B-AS	complex unclassified	structured_complex	1
Cis2_sRNA	Superfamily of Cis2_sRNA	complex unclassified	structured_complex	1
Cis90_sRNA	Superfamily of Cis90_sRNA	complex unclassified	structured_complex	1
CncR1	Superfamily of CncR1	complex unclassified	structured_complex	1
CoTC_ribozyme	Superfamily of CoTC_ribozyme	complex unclassified	structured_complex	1
CPEB3_ribozyme	Superfamily of CPEB3_ribozyme	complex unclassified	structured_complex	1
CrcZ	Superfamily of CrcZ	complex unclassified	structured_complex	1
CrfA	Superfamily of CrfA	complex unclassified	structured_complex	1
cspA	Superfamily of cspA	complex unclassified	structured_complex	1
Csr_Rsm_clan	Families that are bound by multiple regulatory proteins called CsrA or RsmA.	complex unclassified	structured_complex	7
CTV_rep_sig	Superfamily of CTV_rep_sig	complex unclassified	structured_complex	1
DAOA-AS1_2	Superfamily of DAOA-AS1_2	complex unclassified	structured_complex	1
DLEU1_1	Superfamily of DLEU1_1	complex unclassified	structured_complex	1
DLEU1_2	Superfamily of DLEU1_2	complex unclassified	structured_complex	1
DM_SisR1	Superfamily of DM_SisR1	complex unclassified	structured_complex	1
Downstream-peptide	Superfamily of Downstream-peptide	complex unclassified	structured_complex	1
drz-agam-2-2	Superfamily of drz-agam-2-2	complex unclassified	structured_complex	1
EBER1	Superfamily of EBER1	complex unclassified	structured_complex	1
EF0408_EF0409	Superfamily of EF0408_EF0409	complex unclassified	structured_complex	1
EF0820_EF0821	Superfamily of EF0820_EF0821	complex unclassified	structured_complex	1
EF0869_EF0870	Superfamily of EF0869_EF0870	complex unclassified	structured_complex	1
EF1368_EF1369	Superfamily of EF1368_EF1369	complex unclassified	structured_complex	1
Entero_OriR	Superfamily of Entero_OriR	complex unclassified	structured_complex	1
epsC	Superfamily of epsC	complex unclassified	structured_complex	1
Erse	Superfamily of Erse	complex unclassified	structured_complex	1
FdoG1_thermometer	Superfamily of FdoG1_thermometer	complex unclassified	structured_complex	1
FMN	Superfamily of FMN	complex unclassified	structured_complex	1
FTX_5	Superfamily of FTX_5	complex unclassified	structured_complex	1
gadd7	Superfamily of gadd7	complex unclassified	structured_complex	1
GcvB	Superfamily of GcvB	complex unclassified	structured_complex	1
GIR1	Superfamily of GIR1	complex unclassified	structured_complex	1
GNAS-AS1_4	Superfamily of GNAS-AS1_4	complex unclassified	structured_complex	1
GOLLD	Superfamily of GOLLD	complex unclassified	structured_complex	1
HDV_ribozyme	Superfamily of HDV_ribozyme	complex unclassified	structured_complex	1
HEARO	Superfamily of HEARO	complex unclassified	structured_complex	1
hilD_3p_UTR	Superfamily of hilD_3p_UTR	complex unclassified	structured_complex	1
HOTTIP_3	Superfamily of HOTTIP_3	complex unclassified	structured_complex	1
HOXA11-AS1_2	Superfamily of HOXA11-AS1_2	complex unclassified	structured_complex	1
HOXA11-AS1_4	Superfamily of HOXA11-AS1_4	complex unclassified	structured_complex	1
HOXA11-AS1_6	Superfamily of HOXA11-AS1_6	complex unclassified	structured_complex	1
Hsp83_3_UTR	Superfamily of Hsp83_3_UTR	complex unclassified	structured_complex	1
HYMAI	Superfamily of HYMAI	complex unclassified	structured_complex	1
icaR_3p_UTR	Superfamily of icaR_3p_UTR	complex unclassified	structured_complex	1
IFN_gamma	Superfamily of IFN_gamma	complex unclassified	structured_complex	1
IMES-1	Superfamily of IMES-1	complex unclassified	structured_complex	1
IS061	Superfamily of IS061	complex unclassified	structured_complex	1
IS128	Superfamily of IS128	complex unclassified	structured_complex	1
iscRS	Superfamily of iscRS	complex unclassified	structured_complex	1
isrF	Superfamily of isrF	complex unclassified	structured_complex	1
isrG	Superfamily of isrG	complex unclassified	structured_complex	1
isrH	Superfamily of isrH	complex unclassified	structured_complex	1
isrL	Superfamily of isrL	complex unclassified	structured_complex	1
IsrM	Superfamily of IsrM	complex unclassified	structured_complex	1
isrQ	Superfamily of isrQ	complex unclassified	structured_complex	1
JA03	Superfamily of JA03	complex unclassified	structured_complex	1
KCNQ1OT1_2	Superfamily of KCNQ1OT1_2	complex unclassified	structured_complex	1
LINC00901	Superfamily of LINC00901	complex unclassified	structured_complex	1
lincRNA-p21_1	Superfamily of lincRNA-p21_1	complex unclassified	structured_complex	1
Lysine	Superfamily of Lysine	complex unclassified	structured_complex	1
manA	Superfamily of manA	complex unclassified	structured_complex	1
Mcr7	Superfamily of Mcr7	complex unclassified	structured_complex	1
MIAT_exon5_3	Superfamily of MIAT_exon5_3	complex unclassified	structured_complex	1
MicL	Superfamily of MicL	complex unclassified	structured_complex	1
Mico1	Superfamily of Mico1	complex unclassified	structured_complex	1
MOCO_RNA_motif	Superfamily of MOCO_RNA_motif	complex unclassified	structured_complex	1
MPMV_package	Superfamily of MPMV_package	complex unclassified	structured_complex	1
Ms1	Superfamily of Ms1	complex unclassified	structured_complex	1
Ncrwmel02	Superfamily of Ncrwmel02	complex unclassified	structured_complex	1
NRON	Superfamily of NRON	complex unclassified	structured_complex	1
NrsZ	Superfamily of NrsZ	complex unclassified	structured_complex	1
OLE	Superfamily of OLE	complex unclassified	structured_complex	1
OppA_thermometer	Superfamily of OppA_thermometer	complex unclassified	structured_complex	1
ovine_lenti_FSE	Superfamily of ovine_lenti_FSE	complex unclassified	structured_complex	1
P17	Superfamily of P17	complex unclassified	structured_complex	1
P24	Superfamily of P24	complex unclassified	structured_complex	1
P33	Superfamily of P33	complex unclassified	structured_complex	1
P34	Superfamily of P34	complex unclassified	structured_complex	1
P4	Superfamily of P4	complex unclassified	structured_complex	1
P6	Superfamily of P6	complex unclassified	structured_complex	1
Parecho_CRE	Superfamily of Parecho_CRE	complex unclassified	structured_complex	1
PART1_2	Superfamily of PART1_2	complex unclassified	structured_complex	1
PCA3_2	Superfamily of PCA3_2	complex unclassified	structured_complex	1
Pedo-repair	Superfamily of Pedo-repair	complex unclassified	structured_complex	1
Phage_pRNA	Superfamily of Phage_pRNA	complex unclassified	structured_complex	1
PhrS	Superfamily of PhrS	complex unclassified	structured_complex	1
Pistol	Superfamily of Pistol	complex unclassified	structured_complex	1
PK-CuYV_BPYV	Superfamily of PK-CuYV_BPYV	complex unclassified	structured_complex	1
PK-PYVV	Superfamily of PK-PYVV	complex unclassified	structured_complex	1
PK-SPCSV	Superfamily of PK-SPCSV	complex unclassified	structured_complex	1
Polynucleobacter-1	Superfamily of Polynucleobacter-1	complex unclassified	structured_complex	1
psaA	Superfamily of psaA	complex unclassified	structured_complex	1
Pseudomon-groES	Superfamily of Pseudomon-groES	complex unclassified	structured_complex	1
psRNA2	Superfamily of psRNA2	complex unclassified	structured_complex	1
psRNA6	Superfamily of psRNA6	complex unclassified	structured_complex	1
PVT1_1	Superfamily of PVT1_1	complex unclassified	structured_complex	1
PVT1_2	Superfamily of PVT1_2	complex unclassified	structured_complex	1
PVT1_4	Superfamily of PVT1_4	complex unclassified	structured_complex	1
RAGATH-6	Superfamily of RAGATH-6	complex unclassified	structured_complex	1
RAGATH-8	Superfamily of RAGATH-8	complex unclassified	structured_complex	1
RalA	Superfamily of RalA	complex unclassified	structured_complex	1
RCNMV_TE_DR1	Superfamily of RCNMV_TE_DR1	complex unclassified	structured_complex	1
Rev11	Superfamily of Rev11	complex unclassified	structured_complex	1
Rev13	Superfamily of Rev13	complex unclassified	structured_complex	1
Rev24	Superfamily of Rev24	complex unclassified	structured_complex	1
Rev39_5p_UTR	Superfamily of Rev39_5p_UTR	complex unclassified	structured_complex	1
Rev41	Superfamily of Rev41	complex unclassified	structured_complex	1
Rev42_5p_UTR	Superfamily of Rev42_5p_UTR	complex unclassified	structured_complex	1
Rev44	Superfamily of Rev44	complex unclassified	structured_complex	1
Rev72	Superfamily of Rev72	complex unclassified	structured_complex	1
Ricks_sRNA10	Superfamily of Ricks_sRNA10	complex unclassified	structured_complex	1
rivX	Superfamily of rivX	complex unclassified	structured_complex	1
rli24	Superfamily of rli24	complex unclassified	structured_complex	1
rli26	Superfamily of rli26	complex unclassified	structured_complex	1
rli32	Superfamily of rli32	complex unclassified	structured_complex	1
rli33	Superfamily of rli33	complex unclassified	structured_complex	1
rli37	Superfamily of rli37	complex unclassified	structured_complex	1
rli40	Superfamily of rli40	complex unclassified	structured_complex	1
rli41	Superfamily of rli41	complex unclassified	structured_complex	1
rli42	Superfamily of rli42	complex unclassified	structured_complex	1
rli43	Superfamily of rli43	complex unclassified	structured_complex	1
rli47	Superfamily of rli47	complex unclassified	structured_complex	1
rli54	Superfamily of rli54	complex unclassified	structured_complex	1
rli62	Superfamily of rli62	complex unclassified	structured_complex	1
rliA	Superfamily of rliA	complex unclassified	structured_complex	1
rliD	Superfamily of rliD	complex unclassified	structured_complex	1
rliE	Superfamily of rliE	complex unclassified	structured_complex	1
rliF	Superfamily of rliF	complex unclassified	structured_complex	1
rliG	Superfamily of rliG	complex unclassified	structured_complex	1
rliH	Superfamily of rliH	complex unclassified	structured_complex	1
rliI	Superfamily of rliI	complex unclassified	structured_complex	1
RMST_2	Superfamily of RMST_2	complex unclassified	structured_complex	1
RMST_6	Superfamily of RMST_6	complex unclassified	structured_complex	1
RMST_7	Superfamily of RMST_7	complex unclassified	structured_complex	1
RNAIII	Superfamily of RNAIII	complex unclassified	structured_complex	1
rne-II	Superfamily of rne-II	complex unclassified	structured_complex	1
rne5	Superfamily of rne5	complex unclassified	structured_complex	1
RRE	Superfamily of RRE	complex unclassified	structured_complex	1
RsaC	Superfamily of RsaC	complex unclassified	structured_complex	1
RsaH	Superfamily of RsaH	complex unclassified	structured_complex	1
RsaJ	Superfamily of RsaJ	complex unclassified	structured_complex	1
RsaOG	Superfamily of RsaOG	complex unclassified	structured_complex	1
RSV_RNA	Superfamily of RSV_RNA	complex unclassified	structured_complex	1
RUF1	Superfamily of RUF1	complex unclassified	structured_complex	1
RUF20	Superfamily of RUF20	complex unclassified	structured_complex	1
RUF21	Superfamily of RUF21	complex unclassified	structured_complex	1
RUF4	Superfamily of RUF4	complex unclassified	structured_complex	1
ryfA	Superfamily of ryfA	complex unclassified	structured_complex	1
sagA	Superfamily of sagA	complex unclassified	structured_complex	1
sau-53	Superfamily of sau-53	complex unclassified	structured_complex	1
sbcD	Superfamily of sbcD	complex unclassified	structured_complex	1
scr4677	Superfamily of scr4677	complex unclassified	structured_complex	1
scr5239	Superfamily of scr5239	complex unclassified	structured_complex	1
Sernc350	Superfamily of Sernc350	complex unclassified	structured_complex	1
Sernc389	Superfamily of Sernc389	complex unclassified	structured_complex	1
SgrS	Superfamily of SgrS	complex unclassified	structured_complex	1
Six3os1_5	Superfamily of Six3os1_5	complex unclassified	structured_complex	1
Six3os1_7	Superfamily of Six3os1_7	complex unclassified	structured_complex	1
SMAD5-AS1_1	Superfamily of SMAD5-AS1_1	complex unclassified	structured_complex	1
SMAD5-AS1_2	Superfamily of SMAD5-AS1_2	complex unclassified	structured_complex	1
SMCR2_1	Superfamily of SMCR2_1	complex unclassified	structured_complex	1
SMCR2_2	Superfamily of SMCR2_2	complex unclassified	structured_complex	1
sot0042	Superfamily of sot0042	complex unclassified	structured_complex	1
sot2652	Superfamily of sot2652	complex unclassified	structured_complex	1
SOX2OT_exon1	Superfamily of SOX2OT_exon1	complex unclassified	structured_complex	1
SOX2OT_exon3	Superfamily of SOX2OT_exon3	complex unclassified	structured_complex	1
speF	Superfamily of speF	complex unclassified	structured_complex	1
SpF66_sRNA	Superfamily of SpF66_sRNA	complex unclassified	structured_complex	1
Sphinx_1	Superfamily of Sphinx_1	complex unclassified	structured_complex	1
Spi-1	Superfamily of Spi-1	complex unclassified	structured_complex	1
SprX	Superfamily of SprX	complex unclassified	structured_complex	1
SPRY4-IT1_2	Superfamily of SPRY4-IT1_2	complex unclassified	structured_complex	1
sR035	Superfamily of sR035	complex unclassified	structured_complex	1
sraL	Superfamily of sraL	complex unclassified	structured_complex	1
srg1	Superfamily of srg1	complex unclassified	structured_complex	1
Ssr1	Superfamily of Ssr1	complex unclassified	structured_complex	1
SSRC30	Superfamily of SSRC30	complex unclassified	structured_complex	1
SSRC38	Superfamily of SSRC38	complex unclassified	structured_complex	1
SSRC8_2	Superfamily of SSRC8_2	complex unclassified	structured_complex	1
ST7-OT4_1	Superfamily of ST7-OT4_1	complex unclassified	structured_complex	1
STnc100	Superfamily of STnc100	complex unclassified	structured_complex	1
STnc170	Superfamily of STnc170	complex unclassified	structured_complex	1
STnc30	Superfamily of STnc30	complex unclassified	structured_complex	1
STnc361	Superfamily of STnc361	complex unclassified	structured_complex	1
STnc470	Superfamily of STnc470	complex unclassified	structured_complex	1
STnc500	Superfamily of STnc500	complex unclassified	structured_complex	1
STnc510	Superfamily of STnc510	complex unclassified	structured_complex	1
STnc550	Superfamily of STnc550	complex unclassified	structured_complex	1
STnc590	Superfamily of STnc590	complex unclassified	structured_complex	1
STnc630	Superfamily of STnc630	complex unclassified	structured_complex	1
sucA-II	Superfamily of sucA-II	complex unclassified	structured_complex	1
SurA	Superfamily of SurA	complex unclassified	structured_complex	1
sX11	Superfamily of sX11	complex unclassified	structured_complex	1
sX4	Superfamily of sX4	complex unclassified	structured_complex	1
sX6	Superfamily of sX6	complex unclassified	structured_complex	1
T-box	Superfamily of T-box	complex unclassified	structured_complex	1
Teg23	Superfamily of Teg23	complex unclassified	structured_complex	1
TeloSII_ncR43	Superfamily of TeloSII_ncR43	complex unclassified	structured_complex	1
THF	Superfamily of THF	complex unclassified	structured_complex	1
Toga_5_CRE	Superfamily of Toga_5_CRE	complex unclassified	structured_complex	1
Tombus_3_IV	Superfamily of Tombus_3_IV	complex unclassified	structured_complex	1
Tombus_5	Superfamily of Tombus_5	complex unclassified	structured_complex	1
TP73-AS1	Superfamily of TP73-AS1	complex unclassified	structured_complex	1
TPP	Superfamily of TPP	complex unclassified	structured_complex	1
tsr1	Superfamily of tsr1	complex unclassified	structured_complex	1
tsr24	Superfamily of tsr24	complex unclassified	structured_complex	1
TTC28-AS1_1	Superfamily of TTC28-AS1_1	complex unclassified	structured_complex	1
TUG1_3	Superfamily of TUG1_3	complex unclassified	structured_complex	1
TUG1_4	Superfamily of TUG1_4	complex unclassified	structured_complex	1
Twister-P5	Superfamily of Twister-P5	complex unclassified	structured_complex	1
Va-907	Superfamily of Va-907	complex unclassified	structured_complex	1
Vax2os1_2	Superfamily of Vax2os1_2	complex unclassified	structured_complex	1
Vax2os1_3	Superfamily of Vax2os1_3	complex unclassified	structured_complex	1
Vg1_ribozyme	Superfamily of Vg1_ribozyme	complex unclassified	structured_complex	1
VR-RNA	Superfamily of VR-RNA	complex unclassified	structured_complex	1
wcaG	Superfamily of wcaG	complex unclassified	structured_complex	1
WT1-AS_3	Superfamily of WT1-AS_3	complex unclassified	structured_complex	1
WT1-AS_7	Superfamily of WT1-AS_7	complex unclassified	structured_complex	1
Xoo1	Superfamily of Xoo1	complex unclassified	structured_complex	1
Xoo8	Superfamily of Xoo8	complex unclassified	structured_complex	1
ydaO-yuaA	Superfamily of ydaO-yuaA	complex unclassified	structured_complex	1
YenS	Superfamily of YenS	complex unclassified	structured_complex	1
Yfr21	Superfamily of Yfr21	complex unclassified	structured_complex	1
Yfr8	Superfamily of Yfr8	complex unclassified	structured_complex	1
YFV_3UTR	Superfamily of YFV_3UTR	complex unclassified	structured_complex	1
ykoK	Superfamily of ykoK	complex unclassified	structured_complex	1
Ysr141	Superfamily of Ysr141	complex unclassified	structured_complex	1
Ysr155(RyfD)	Superfamily of Ysr155(RyfD)	complex unclassified	structured_complex	1
Ysr202	Superfamily of Ysr202	complex unclassified	structured_complex	1
Ysr35	Superfamily of Ysr35	complex unclassified	structured_complex	1

Showing 1 to 271 of 271 entries

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